Gene information
Experiments

Viewing 1 experiment on SoxE.1[show all]

Experiment
All wildtype expression patterns
Experiment 1 by Craig Magie
Wildtype control
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Showing data for 1 experiment on SoxE.1.
Egg Cleavage Blastula Early Gastrula Mid Gastrula Late Gastrula
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Early Planula Planula Late Planula Tentacle bud Early juvenile Juvenile/Adult
 
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Description

Papers about this experiment[show all]

No papers added yet!

Added by

Craig Magie on 30 Jul 2008 (in Martindale lab)

Experiment (Wildtype)

Assay (RNA in situ)

  • Detection method:
  • Hybridization temperature:
  • Accession number:
  • Vector backbone:
  • Probe type (full length, RACE etc):
  • Probe generation (digest, PCR etc):
  • Antisense probe restriction enzyme or PCR primers:
  • Antisense probe polymerase:
  • Insert size:
Expression summary
Showing data from 1 experiment on SoxE.1
Egg
Cleavage
Blastula
Early Gastrula
Mid Gastrula
Late Gastrula
Early Planula
Planula
Late Planula
Tentacle bud
Early juvenile
Juvenile/Adult
Expression
No expression
Not determined
Genes with a similar expression pattern
GeneSynonymsSpeciesScoreAdded by
NvHD060 NvHx131, hox, ax6a Nematostella vectensis 0.25 Kevin Pang on 25 Aug 2008[Add Experiment] [Edit ] [Delete ]
SoxF.1 Nematostella vectensis 0.2 Craig Magie on 24 Jul 2008[Add Experiment] [Edit ] [Delete ]
Msx2 Msx2, assymetric msx Nematostella vectensis 0.17 Kevin Pang on 30 Sep 2008[Add Experiment] [Edit ] [Delete ]
Gbx Gastrulation brain homeobox Nematostella vectensis 0.15 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
Vent1 Nematostella vectensis 0.15 Eric Roettinger on 4 Feb 2009[Add Experiment] [Edit ] [Delete ]
Anthox7 Ax7 Nematostella vectensis 0.15 Kevin Pang on 20 Aug 2008[Add Experiment] [Edit ] [Delete ]
Anthox8b Ax8b Nematostella vectensis 0.14 Kevin Pang on 20 Aug 2008[Add Experiment] [Edit ] [Delete ]
OtxA orthodenticle Nematostella vectensis 0.13 Patricia Lee on 24 Feb 2009[Add Experiment] [Edit ] [Delete ]
FoxB forkhead transcription factor B Nematostella vectensis 0.12 Craig Magie on 31 Jul 2008[Add Experiment] [Edit ] [Delete ]
Rough HD126, exex, homeobox Nematostella vectensis 0.12 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
Gli cubitus interruptus (ci) Nematostella vectensis 0.11 Patricia Lee on 2 Apr 2009[Add Experiment] [Edit ] [Delete ]
Brachyury Bra, T-gene Nematostella vectensis 0.11 Mattias Ormestad on 25 Nov 2008[Add Experiment] [Edit ] [Delete ]
wntA Nematostella vectensis 0.11 Eric Roettinger on 5 Oct 2012[Add Experiment] [Edit ] [Delete ]
Patched Ptc Nematostella vectensis 0.1 Patricia Lee on 2 Apr 2009[Add Experiment] [Edit ] [Delete ]
Hex Nematostella vectensis 0.1 Eric Roettinger on 4 Feb 2009[Add Experiment] [Edit ] [Delete ]
bicaudalC-like1 bic Nematostella vectensis 0.1 Eric Roettinger on 1 Jul 2010[Add Experiment] [Edit ] [Delete ]
Churchill ChCh Nematostella vectensis 0.1 Patricia Lee on 3 Mar 2009[Add Experiment] [Edit ] [Delete ]
Hint2 Nematostella vectensis 0.09 Patricia Lee on 12 Mar 2009[Add Experiment] [Edit ] [Delete ]
Hedgehog2 Hh2, hedgehog 2 Nematostella vectensis 0.08 Patricia Lee on 5 Mar 2009[Add Experiment] [Edit ] [Delete ]
MoxA mox homeobox, mox1 Nematostella vectensis 0.08 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
FoxA Forkhead, HNF3 Nematostella vectensis 0.08 Mattias Ormestad on 25 Nov 2008[Add Experiment] [Edit ] [Delete ]
Smad1/5 Nematostella vectensis 0.07 Eric Roettinger on 19 Feb 2009[Add Experiment] [Edit ] [Delete ]
Hedgehog1 Hh1, hedgehog 1 Nematostella vectensis 0.07 Patricia Lee on 5 Mar 2009[Add Experiment] [Edit ] [Delete ]
Anthox6 Ax6 Nematostella vectensis 0.07 Kevin Pang on -[Add Experiment] [Edit ] [Delete ]
Sox1 Nematostella vectensis 0.07 Craig Magie on 24 Jul 2008[Add Experiment] [Edit ] [Delete ]
Wnt16 Nematostella vectensis 0.07 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
Wnt3 Nematostella vectensis 0.07 Mattias Ormestad on 25 Nov 2008[Add Experiment] [Edit ] [Delete ]
Rx Nv129, Rx, retinal homeobox Nematostella vectensis 0.06 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
Otp orthopedia homeobox Nematostella vectensis 0.06 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
Anthox1 NvAx1, "posterior hox" Nematostella vectensis 0.06 Kevin Pang on 20 Aug 2008[Add Experiment] [Edit ] [Delete ]
Hlxb9 motor neuron homeobox, MNX, HB9, MNR Nematostella vectensis 0.06 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
OtxB Orthodenticle Nematostella vectensis 0.06 Mattias Ormestad on 15 Oct 2008[Add Experiment] [Edit ] [Delete ]
Msx Msx1, Ms52-1, HD046 Nematostella vectensis 0.05 Kevin Pang on 30 Sep 2008[Add Experiment] [Edit ] [Delete ]
OtxC orthodenticle Nematostella vectensis 0.04 Patricia Lee on 24 Feb 2009[Add Experiment] [Edit ] [Delete ]
Sprouty Nematostella vectensis 0.04 Patricia Lee on 3 Mar 2009[Add Experiment] [Edit ] [Delete ]
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Gene ontology, pathways & orthologs

No protein id has been added for this gene so we are unable to check our GO dataset

No protein id has been added for this gene so we are unable to check our KOG (euKaryotic Orthologous Groups) dataset

No protein id has been added for this gene so we are unable to check our EC dataset