Gene information
Experiments

Viewing 1 experiment on hd050[show all]

Experiment
All wildtype expression patterns
Experiment 1 by Eric Roettinger
Wildtype control
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Showing data for 1 experiment on hd050.
Egg Cleavage Blastula Early Gastrula Mid Gastrula Late Gastrula
 
 
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Early Planula Planula Late Planula Tentacle bud Early juvenile Juvenile/Adult
 
 
 
 
 
 

Description

Papers about this experiment[show all]

No papers added yet!

Added by

Eric Roettinger on 11 Apr 2012 (in Martindale lab)

Experiment (Wildtype)

Assay (RNA in situ)

  • Detection method: NBT/BCIP
  • Hybridization temperature: 62 ºC
  • Accession number: abb86483.1
  • Vector backbone: pGemT
  • Probe type (full length, RACE etc):
  • Probe generation (digest, PCR etc): PCR
  • Antisense probe restriction enzyme or PCR primers:
  • Antisense probe polymerase:
  • Insert size:
Expression summary
Showing data from 1 experiment on hd050
Egg
Cleavage
Blastula
Early Gastrula
Mid Gastrula
Late Gastrula
Early Planula
Planula
Late Planula
Tentacle bud
Early juvenile
Juvenile/Adult
Expression
No expression
Not determined
Genes with a similar expression pattern
GeneSynonymsSpeciesScoreAdded by
elkA-like Nematostella vectensis 1 Eric Roettinger on 11 Apr 2012[Add Experiment] [Edit ] [Delete ]
nk2-like NK homeobox transcription factor Nematostella vectensis 1 Eric Roettinger on 9 Apr 2012[Add Experiment] [Edit ] [Delete ]
evx even-skipped, eve Nematostella vectensis 1 Eric Roettinger on 4 Oct 2012[Add Experiment] [Edit ] [Delete ]
unc4-like homeobox transcription factor Nematostella vectensis 0.5 Eric Roettinger on 31 Aug 2012[Add Experiment] [Edit ] [Delete ]
phtf1-like putative homeobox transcription factor 1-like Nematostella vectensis 0.5 Eric Roettinger on 11 Apr 2012[Add Experiment] [Edit ] [Delete ]
foxq1 Forkhead transcription factor Q1 Nematostella vectensis 0.5 Eric Roettinger on 30 Aug 2012[Add Experiment] [Edit ] [Delete ]
axin-like axin Nematostella vectensis 0.5 Eric Roettinger on 30 Aug 2012[Add Experiment] [Edit ] [Delete ]
Snail B Nematostella vectensis 0.5 Eric Roettinger on 3 Oct 2012[Add Experiment] [Edit ] [Delete ]
frizzled 10 Fz10, frizzled receptor 10 Nematostella vectensis 0.5 Eric Roettinger on 4 Oct 2012[Add Experiment] [Edit ] [Delete ]
strabismus Nematostella vectensis 0.5 Eric Roettinger on 5 Oct 2012[Add Experiment] [Edit ] [Delete ]
ashB Nematostella vectensis 0.5 Eric Roettinger on 5 Oct 2012[Add Experiment] [Edit ] [Delete ]
gsc goosecoid Nematostella vectensis 0.5 Eric Roettinger on 4 Oct 2012[Add Experiment] [Edit ] [Delete ]
tolloid tld Nematostella vectensis 0.5 Eric Roettinger on 4 Oct 2012[Add Experiment] [Edit ] [Delete ]
Vasa 1 Nematostella vectensis 0.5 Eric Roettinger on 3 Oct 2012[Add Experiment] [Edit ] [Delete ]
nk-like 13 homeobox transcription factor Nematostella vectensis 0.5 Eric Roettinger on 13 Apr 2012[Add Experiment] [Edit ] [Delete ]
tbx20-like T-box transcription factor 20-like Nematostella vectensis 0.5 Eric Roettinger on 9 Apr 2012[Add Experiment] [Edit ] [Delete ]
smad4-like Mother against dpp (Mad), Sma Nematostella vectensis 0.5 Eric Roettinger on 9 Apr 2012[Add Experiment] [Edit ] [Delete ]
admp-related anti-dorsalizing morphogenetic protein - related Nematostella vectensis 0.5 Eric Roettinger on 9 Apr 2012[Add Experiment] [Edit ] [Delete ]
porcupine-like Nematostella vectensis 0.33 Eric Roettinger on 11 Apr 2012[Add Experiment] [Edit ] [Delete ]
Snail A Nematostella vectensis 0.33 Eric Roettinger on 3 Oct 2012[Add Experiment] [Edit ] [Delete ]
nfix-like transcription factor nuclear factor one X Nematostella vectensis 0.33 Eric Roettinger on 30 Aug 2012[Add Experiment] [Edit ] [Delete ]
vasa-like Nematostella vectensis 0.33 Eric Roettinger on 9 Apr 2012[Add Experiment] [Edit ] [Delete ]
Pl10 Nematostella vectensis 0.25 Eric Roettinger on 2 Oct 2012[Add Experiment] [Edit ] [Delete ]
Vasa 2 Nematostella vectensis 0.2 Eric Roettinger on 3 Oct 2012[Add Experiment] [Edit ] [Delete ]
Nanos 2 Nematostella vectensis 0.2 Eric Roettinger on 2 Oct 2012[Add Experiment] [Edit ] [Delete ]
nkd1-like Naked cuticle 1 Nematostella vectensis 0.17 Eric Roettinger on 30 Aug 2012[Add Experiment] [Edit ] [Delete ]
Smad1/5 Nematostella vectensis 0.13 Eric Roettinger on 19 Feb 2009[Add Experiment] [Edit ] [Delete ]
Sox1 Nematostella vectensis 0.11 Craig Magie on 24 Jul 2008[Add Experiment] [Edit ] [Delete ]
Hlxb9 motor neuron homeobox, MNX, HB9, MNR Nematostella vectensis 0.09 Kevin Pang on 14 Oct 2008[Add Experiment] [Edit ] [Delete ]
FGF8A fibroblast growth factor Nematostella vectensis 0.09 Patricia Lee on 26 Feb 2009[Add Experiment] [Edit ] [Delete ]
Gli cubitus interruptus (ci) Nematostella vectensis 0.08 Patricia Lee on 2 Apr 2009[Add Experiment] [Edit ] [Delete ]
OtxC orthodenticle Nematostella vectensis 0.06 Patricia Lee on 24 Feb 2009[Add Experiment] [Edit ] [Delete ]
Sprouty Nematostella vectensis 0.05 Patricia Lee on 3 Mar 2009[Add Experiment] [Edit ] [Delete ]
OtxA orthodenticle Nematostella vectensis 0.05 Patricia Lee on 24 Feb 2009[Add Experiment] [Edit ] [Delete ]
OtxB Orthodenticle Nematostella vectensis 0.04 Mattias Ormestad on 15 Oct 2008[Add Experiment] [Edit ] [Delete ]
[Select all][Select none]
Gene ontology, pathways & orthologs

Gene Ontology based on the information of protein id 57885

  • biological_process, regulation of transcription, DNA-dependent
  • cellular_component, nucleus
  • molecular_function, DNA binding
  • molecular_function, transcription factor activity

    • KOG (euKaryotic Orthologous Groups) entries based on the information of protein id 57885

    • POORLY CHARACTERIZED, General function prediction only , Transcription factor BarH and related HOX domain proteins, KOG0488

      • There doesn't seem to be an entry for this gene in our current EC dataset

      We suggest that you try visiting this gene entry in the genome database for this species