Gene information
Experiments

Viewing 1 experiment on brachyury[show all]

Experiment
All wildtype expression patterns
Experiment 1 by Eric Roettinger
Wildtype control
NiCl (nickel chloride) @ 50uM
Toolbox
Images
Showing data for 1 experiment on brachyury.
Egg Cleavage Blastula Early Gastrula Mid Gastrula Late Gastrula
Lateral View
Lateral View
  • Lateral View
  • Lateral View
 
  • Vegetal View
  • Lateral View
  • Lateral View
 
Pre-hatching Post-hatching Tonaria larva Agassiz Juvenile Adult
  • Ventral View
  • Lateral View
  • Lateral View
 
  • Lateral View
  • Lateral View
 
 
 

Description

Papers about this experiment[show all]

Tagawa K (1998) and Peterson KJ (1999)

Added by

Eric Roettinger on 3 Jun 2008 (in Martindale lab)

Experiment (Wildtype)

Assay (RNA in situ)

  • Detection method: NBT/BCIP
  • Hybridization temperature: 65˚C
  • Accession number: AB004912
  • Vector backbone: pGemT
  • Probe type (full length, RACE etc):
  • Probe generation (digest, PCR etc): pcr
  • Antisense probe restriction enzyme or PCR primers: SP6-T7
  • Antisense probe polymerase: SP6
  • Insert size: 1068

Publications

Tagawa K, Humphreys T and Satoh N (1998) Novel pattern of Brachyury gene expression in hemichordate embryos. Mech. Dev. 75, 139-43

Peterson KJ, Cameron RA, Tagawa K, Satoh N and Davidson EH (1999) A comparative molecular approach to mesodermal patterning in basal deuterostomes: the expression pattern of Brachyury in the enteropneust hemichordate Ptychodera flava. Development 126, 85-95

Expression summary
Showing data from 1 experiment on brachyury
Egg
Cleavage
Blastula
Early Gastrula
Mid Gastrula
Late Gastrula
Pre-hatching
Post-hatching
Tonaria larva
Agassiz
Juvenile
Adult
Expression
No expression
Not determined
Genes with a similar expression pattern
GeneSynonymsSpeciesScoreAdded by
Cad caudal Ptychodera flava 0.4 Eric Roettinger on 7 Dec 2009[Add Experiment] [Edit ] [Delete ]
FoxA Forkhead, HNF3 Ptychodera flava 0.32 Eric Roettinger on 17 Jun 2008[Add Experiment] [Edit ] [Delete ]
FgfR1-like Fgfr1l, nou-darake Ptychodera flava 0.29 Eric Roettinger on 16 Mar 2011[Add Experiment] [Edit ] [Delete ]
TGF beta TGFß Ptychodera flava 0.29 Eric Roettinger on 18 Jun 2008[Add Experiment] [Edit ] [Delete ]
Chordin chd Ptychodera flava 0.18 Eric Roettinger on 16 Mar 2011[Add Experiment] [Edit ] [Delete ]
Pea Polyoma enhancer activator (ets and pea domain tra Ptychodera flava 0.17 Eric Roettinger on 22 Jul 2010[Add Experiment] [Edit ] [Delete ]
Otx orthodenticle Ptychodera flava 0.11 Eric Roettinger on 17 Jun 2008[Add Experiment] [Edit ] [Delete ]
Sfrp1-like Secreted frizzled receptor protein 1 -like Ptychodera flava 0.11 Eric Roettinger on 16 Mar 2011[Add Experiment] [Edit ] [Delete ]
SoxB1 Ptychodera flava 0.06 Eric Roettinger on 7 Dec 2009[Add Experiment] [Edit ] [Delete ]
Frizzled5/8 Fz5/8, frizzled receptor 5/8 Ptychodera flava 0.04 Eric Roettinger on 16 Mar 2011[Add Experiment] [Edit ] [Delete ]
[Select all][Select none]
Gene ontology, pathways & orthologs

Sorry, but we currently do not have any GO data for this species

Sorry, but we currently do not have any KOG (euKaryotic Orthologous Groups) data for this species

Sorry, but we currently do not have any EC data for this species